The Cas9 endonuclease from Streptococcus pyogenes (SpCas9) requires two distinct molecular cues to recognize and cleave target DNA:
Guide RNA (sgRNA) matching a 20-nucleotide target protospacer sequence.
mandatory Protospacer Adjacent Motif (PAM): SpCas9 strictly requires the motif $5'\text{-NGG-}3'$ immediately adjacent to the $3'$ end of the protospacer target.
Without the correct PAM sequence, Cas9 cannot unwind the DNA duplex or activate its RuvC and HNH nuclease cleavage domains.
nalysis:
(PAM sequence): Correct.
Correct option: (2) PAM sequence
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Q.27
Animal Genetics and Breeding- ICAR JRF/SRF 2024
MCQ (Single Correct)
The difference between the frequencies in two sexes
Approach to Hardy-Weinberg Equilibrium for Sex-Linked (X-Linked) Genes:
Because heterogametic males ($XY$) receive their single X chromosome exclusively from their mother, whereas homogametic females ($XX$) receive one X from each parent:
In each successive generation of random mating, the difference in allele frequency between males ($q_m$) and females ($q_f$) is:
Thus, the difference between the frequencies in the two sexes is half the difference in the previous generation, but in the opposite direction, oscillating in a damped harmonic series until converging to equilibrium:
$$\bar{q} = \frac{2}{3}q_f + \frac{1}{3}q_m$$
nalysis:
Correct mathematical description of sex-linked allele frequency dynamics.
Correct option: (4) is half the differences in the previous generation, but in other direction
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Q.28
Animal Genetics and Breeding- ICAR JRF/SRF 2024
MCQ (Single Correct)
The relationship coefficient between double first cousin is
Double First Cousins: Two siblings of one family marry two siblings of another family. Their children share all 4 grandparents through 4 independent paths: