Terminal Deoxynucleotidyl Transferase (TdT) is a template-independent DNA polymerase.
It catalyzes the repetitive addition of deoxynucleoside triphosphates (dNTPs) onto the $3'\text{-OH}$ terminus of single-stranded or double-stranded DNA molecules without requiring a template strand.
Biotechnological Applications:
Used in homopolymer tailing (e.g., adding poly-dG or poly-dC tails to vectors and cDNAs for blunt-end cloning).
Labeling $3'$ ends of DNA with radioactive nucleotides or digoxigenin for non-radioactive probes.
TUNEL assay for detecting apoptotic DNA fragmentation.
T4 DNA Ligase (isolated from bacteriophage T4-infected E. coli):
Requires Adenosine Triphosphate (ATP) and $Mg^{2+}$ as essential cofactors to form a phosphodiester bond between adjacent $5'$-phosphate and $3'$-hydroxyl ends.
Reaction mechanism: Ligase-AMP intermediate formation via ATP hydrolysis, AMP transfer to $5'$-phosphate, and subsequent phosphodiester bond closure with release of free AMP.
In contrast, native bacterial E. coli DNA ligase utilizes $NAD^+$ (nicotinamide adenine dinucleotide) rather than ATP.
nalysis:
(ATP): Correct.
Correct option: (1) ATP
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24
ICAR JRF Fish Biotechnology 29 Jun 2024Shift 1
MCQ (Single Correct)+4−1
The process of RNA inactivation by siRNAs is termed as
First discovered in C. elegans by Andrew Fire and Craig Mello (1998, Nobel Prize 2006):
RNA interference is an evolutionarily conserved post-transcriptional gene silencing mechanism where short double-stranded RNA molecules trigger sequence-specific mRNA degradation.
Exogenous or endogenous double-stranded RNA is cleaved by the ribonuclease Dicer into $\approx 21-23\text{ bp}$ small interfering RNAs (siRNAs).
siRNAs are loaded into the RISC (RNA-Induced Silencing Complex), unwound to a guide strand, and direct the endonuclease Argonaute (Ago2) to cleave complementary target mRNAs.
nalysis:
(RNA interference): Correct.
Correct option: (3) RNA interference
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